CDS
| Accession Number | TCMCG065C30335 |
| gbkey | CDS |
| Protein Id | XP_004981744.1 |
| Location | complement(join(5411820..5412057,5412559..5412640,5412643..5412851,5413123..5413939,5414038..5416096)) |
| Gene | LOC101755801 |
| GeneID | 101755801 |
| Organism | Setaria italica |
Protein
| Length | 1135aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_004981687.4 |
| Definition | LOW QUALITY PROTEIN: phytochrome C [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | F |
| Description | Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12120
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04712
[VIEW IN KEGG] map04712 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGTCGTCATCGCGGTCCAACAACCGGGGGACATGCTCCCGGAGCAGCTCGGCGCGGTCCAAGCACAGCGCGCGGGTGGTGGCGCAGACGCCCGTGGACGCGCAGCTGCACGCCGAGTTCGAGGGCTCCCAGCGCCACTTCGACTACTCCTCGTCGGTGGGCGCCGCCAACCGCCCTTTGGCCAGCACCAGCACCGTCTCCGCCTACCTCCAGACCATGCAGCGGGGCCGCTACATCCAGCCCTTCGGCTGCCTGCTCGCCGTCCACCCGGACACCTTCGCGCTGCTCGCCTACAGCGAGAACGCGCCCGAGATGCTCGACCTCACGCCGCACGCCGTCCCCACCATCGACCAGCGGGACGCGCTCGCCGTCGGCGCCGACGTGCGCACGCTCTTCCGCTCCCAAAGCTCCGTCGCGCTGCACAAGGCCGCCACCTTCGGGGAGGTCAACCTGCTCAACCCCATCCTCGTGCACGCCAGGACGTTGGGGAAGCCCTTCTACGCCATTATGCACCGCATCGACGTCGGCCTCGTCATCGATCTCGAGCCGGTCAACCCCGCCGACGTCCCGGTCACCGCTGCGGGCGCGCTCAAGTCGTACAAGCTCGCCGCCAAGGCTATCTCCAGGCTGCAGTCGCTGCCCAGCGGGAACCTCTCGCTGCTCTGCGATGTCCTTGTCCGTGAGGTGAGCGAGCTCACGGGCTACGACAGGGTCATGGCGTACAAGTTCCATGAGGATGAGCACGGCGAGGTTATCGCCGAGTGCAGGAGATCTGATCTGGAGCCGTATCTTGGCCTGCACTACCCAGCCACTGACATCCCACAGGCGTCCAGGTTTCTCTTTATGAAGAACAAAGTGCGGATGATATGCGATTACTCTGCTGTTCCAGTGAAGATCATTCAGGATGATAGCCTAGCACAGCCTCTCAGCCTATGTGGTTCCACGCTCCGGGCTCCCCATGGTTGCCATGCGCAATACATGGCAAACATGGGCTCTGTTGCGTCGCTTGTGATGTCAGTAACTATAAACGAAGATGAGGAGGATGAGGATACTGGGAGTGACCAGCAGCCCAAAGGCAGGAAGCTGTGGGGGCTGGTGGTCTGCCATCACACGAGCCCGAGGTTCGTTCCTTTCCCGCTAAGGTATGCTTGCGAGTTTCTCTTGCAAGTGTTCGGCATACAGCTCAACAAGGAGGTAGAACTGGCTGCTCAGGCAAAGGAGAGGCACATCCTCCGAACGCAAACCCTTCTGTGTGACATGCTCTTGCGGGATGCCCCTGTTGGGATATTTACCCAGTCGCCTAATGTGATGGATCTAGTAAAGTGTGATGGAGCTGCACTGTACTACCAAAACCAGCTTTGGGCGCTCGGATCGGTTCCCTCCGAGGCAGAGATAAAGAGCATTGTCGCATGGCTGCAGGAGAACCATGATGGTTCAACTGGGCTGAGTACTGACAGCTTAGTGGAAGCGGGTTATCCTGGTGCTGCTGCACTTCGTGAGGTTGTGTGTGGCATGGCAGCCATAAAGATCTCTTCCAAAGATTTCATCTTCTGGTTCCGAGCCCACACAGCAAAGGAGATCAAGTGGGGTGGAGCTAAGCATGAAGCAGTGGATGCAGATGAGAACGGCAGGAAGATGCATCCACGATCTTCGTTCAAGGCCTTCTTGGAGGTGGTTAAATGGAGAAGTGTTCCCTGGGAGGATGTTGAAATGGACGCTATCCATTCTTTGCAGTTAATATTACGTGGCTCCCTGCAAGATGAAGATGCCAACAGAAACAATGTAAGGACCATTGTAAAAGCTCCATCTGAGGATACGAAGAAGATACAGGGGCTACTTGAACTAAGGACAGTTACTGATGAGATGGTCCGCTTAATTGAGACAGCAACTGCCCCTATCTTGGCTGTTGATATTGCCGGTAACATAAATGGATGGAACAATAAAGCCGCAGAACTAACTGGATTACCTGTTATGGAAGCCATAGGGAGGCCTCTGGTAGATCTTGTCATGTCTGATTCTGTTGAAGTGGTTAAACAGATTTTGGACTCAGCTTTACAAGGAATTGAGGAGCAAAATCTGGAAATCAGGCTTAAAACATTCAATCAACAGGAATGCAATGGCCCTGTAATTTTGATGGTCAACTCCTGCTGCAGTCGGGACCTTTCAGAGAAAGTTGTTGGAGTTTGCTTTGTAGCACAAGATTTGACTGGGCAGAAGATGATTATGGATAAATATACTAGGATACAAGGAGACTATGTTGCCATAGTGAAGAACCCCAGCGAGCTCATCCCTCCCATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATGAAGCTATGCAGAAGATTACCGGTATGAAGAGGGAAGATGCCATTGACAAGTTGTTAATTGGGGAGGTTTTCACCCTTCATGATTATGGCTGTAGGGTGAAAGATCATGCTACTCTAACGAAACTTAGCATACTGATGAACACAGTGATTTCGGGTCAGGATCCCGGGAAACTCCCTTTTGGTTTCTTCAACACAGATGGCAAGTATGTGGAATCCCTTCTCACAGCAAATAAGAGGACAAATGCTGAGGGCAAGATCACCGGTGCTCTTTGCTTCCTGCATGTGGCCAGCCCAGAGCTTCAGCATGCTCTCCAGGTGCAGAAAATGTCTGAGCAAGCGGCTACAAACAGCTTTAAGGAATTGACCTACATTCGCCAAGAATTAAGGAACCCACTCAATGGCATGCAATTTACACATAGTTTATTGGAACCTTCCGAGTTGACAGAGGAACAGAGGCGGCTTGTTGCATCTAATGTTCTCTGTCAGGATCAGCTGAAAAAGATTTTGCATGACACTGATCTTGAAAGCATTGAACAGTGCTATATGGAGATGAACACAGTAGAATTCAAACTTGAGGAAGCTCTGAATACAGTCCTCATGCAAGGCATGTCTCTGGGCAAGGAAAAACGGATTTCTATTGAACGTGATTGGCCTGTGGAAGTATCATGCATGCACCTCTATGGAGACAATTTAAGGCTTCAGCAGGTTCTAGCAGACTACCTGGCATGCACTCTTCAATTCACCCAACGCGAAGGACCTATTGTACTCCAAGTCATTCCCAAGAAGGAAAATATTGGGTCTGGCATGCAGATTGCTCATTTAGAGTTCAGGATTGTCCATCCAGCACCGGGTGTCCCAGAGGCCCTAATACAAGAAATGTTCCGGCACAACCCAGAGATGTCTAGGGAGGGCCTCGGCCTGTACATAAGCCAGAAGCTAGTGAAGACGATGAGCGGCACAGTACAGTACCTCCGGGAAGCCGACAGCTCATCGTTCATTGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCAGCAAGCGGTCCAAGCCTTCAACAAGTAGATTCTGA |
| Protein: MSSSRSNNRGTCSRSSSARSKHSARVVAQTPVDAQLHAEFEGSQRHFDYSSSVGAANRPLASTSTVSAYLQTMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTLGKPFYAIMHRIDVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDYSAVPVKIIQDDSLAQPLSLCGSTLRAPHGCHAQYMANMGSVASLVMSVTINEDEEDEDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWALGSVPSEAEIKSIVAWLQENHDGSTGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRAHTAKEIKWGGAKHEAVDADENGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRTIVKAPSEDTKKIQGLLELRTVTDEMVRLIETATAPILAVDIAGNINGWNNKAAELTGLPVMEAIGRPLVDLVMSDSVEVVKQILDSALQGIEEQNLEIRLKTFNQQECNGPVILMVNSCCSRDLSEKVVGVCFVAQDLTGQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNEAMQKITGMKREDAIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNTVISGQDPGKLPFGFFNTDGKYVESLLTANKRTNAEGKITGALCFLHVASPELQHALQVQKMSEQAATNSFKELTYIRQELRNPLNGMQFTHSLLEPSELTEEQRRLVASNVLCQDQLKKILHDTDLESIEQCYMEMNTVEFKLEEALNTVLMQGMSLGKEKRISIERDWPVEVSCMHLYGDNLRLQQVLADYLACTLQFTQPXEGPIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEMSREGLGLYISQKLVKTMSGTVQYLREADSSSFIVLVEFPVAQLSSKRSKPSTSRF |